From: A gene-targeted approach to investigate the intestinal butyrate-producing bacterialcommunity
Functional genes - pyro-sequencing | |||
---|---|---|---|
buk_1F | atcaaYccDggWtcWacWtcWac | buk_1R | acHgcYttYtgRtttaaWgcatg |
buk_2F | atWaatccWggttcWacWtcWacMaa | buk_2R | tgcYttYtggttgagygc |
buk_3F | atMaaTccWggBtcKacMtcaact | buk_3R | gccttctgRttMagKgcatg |
but_1F | cagctIggYatYggIgS | but_1R | aaRtccaIYtgIccVcc |
but_2F | ggWatWggMgsYatgcc | but_2R | aaRtcaaSctgKccDc |
but_3F | gHatYggIgStatgcc | but_3R | aagtcWaaYtgwccRcc |
Functional genes - quantitative PCR | |||
G_buk_F | tgctgtWgttggWagaggYgga | G_buk_R | gcaacIgcYttttgatttaatgcatgg |
G_Acida_F | cgcagaagaacattgacaagg | G_Acida_R | atggcagggttattgtctacataatc |
G_Fprsn_F | gacaagggccgtcaggtcta | G_Fprsn_R | ggacaggcagatRaagctcttgc |
G_RosEub_F | tcaaatcMggIgactgggtWga | G_Ros_R | tcgataccggacatatgccaKgag |
G_Eub_R | tcataaccgcccatatgccatgag | ||
16S genes - quantitative PCR | |||
Cbuty_F | tactctgtaatggaggaagccact | Cbuty_R | ggtacaatgagatgcaacctcgc |
FPR-2F a | ggaggaagaaggtcttcgg | Fprau645R a | Aattccgcctacctctgcact |
Rrec630F a | cgKactagagtgtcggagg | Erec870R a | agtttYattcttgcgaacg |
RrecRi630F a | gtcatctagagtgtcggagg | ||
1132F b | atggYtgtcgtcagctcgtg | 1108R b | Gggttgcgctcgttgc |