| STEC Genome/Plasmid Rank (Plasmid Rank) | Computation time (h:min) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Sample ID | PathoScope 2.0 | PathoScope 1.0 | ReadScan | RINS | PathoScope 2.0 | PathoScope 1.0 | ReadScan | RINS | ||
Rank | Proportion | Rank | Proportion | Rank (Plasmid) | Rank | |||||
1253 | 3 | 1.4% | 8 | 0.3% | 33 (2) | 38 | 0:03 | 0:03 | 0:41 | 18:10 |
4961 | 7 | 0.3% | 6 | 0.6% | 40 (11) | 38 | 1:16 | 0:59 | 1:09:37 | 23:58:39 |
1122 | 14 | 0.0% | 2 | 7.3% | 24 (1) | 38 | 0:00 | 0:00 | 0:21:43 | Â |
1196 | NI | 0.0% | 2 | 3.0% | 38 (1) | 7 | 0:13 | 0:11 | 2:45:37 | 4:19:29 |
4096 | 25 | 0.0% | 8 | 0.6% | 70 (6) | 14 | 0:07 | 0:06 | 0:29:09 | 0:06:00 |
1196b | 4 | 0.8% | 3 | 3.1% | 31 (29) | 9 | 0:04 | 0:04 | 1:27:27 | 7:03:26 |
4961b | 8 | 0.2% | 4 | 0.5% | 35 (16) | 39 | 0:15 | 0:12 | 0:30:49 | 21:30:20 |
1122b | 15 | 0.0% | 2 | 6.6% | 26 (2) | 38 | 0:03 | 0:02 | 0:17:41 | 5:32:59 |
4096b | 22 | 0.0% | 8 | 0.4% | 76 (7) | 36 | 0:01 | 0:01 | 0:14:37 | 0:18:45 |