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Table 1 The probes used in comprehensive microarray polymer profiling (CoMPP) and the target plant cell wall components (PCWCs)

From: Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations

Monoclonal antibody (mAb) and carbohydrate-binding module (CBM) probes

Target PCWCs

LM19

Homogalacturonan (HG) partially methylesterified

INRA-RU1

Backbone of rhamnogalacturonan I

LM5

(1 → 4)-β-D-galactan

LM6

(1 → 5)-α-L-arabinan

LM21

(1 → 4)-β-D-(galacto)(gluco)mannan

BS-400-2

(1 → 3)-β-D-glucan

BS-400-3

(1 → 3)(1 → 4)-β-D-glucan

LM15

Xyloglucan (XXXG motif)

LM10

(1 → 4)-β-D-xylan

LM11

(1 → 4)-β-D-xylan/arabinoxylan

LM23

(1 → 4)-β-D-xylan

CBM3a

Cellulose (crystalline)

LM1

Extensin

JIM20

Extensin

JIM13

Arabinogalactan protein (AGP)

LM2

AGP, β-linked glucuronic acid (GlcA)

CBM20

Starch