| PacBio CCS reads | MiSeq 2 × 250 bp reads (full) | MiSeq 2 × 250 bp reads (sub-sampled)a | |||
---|---|---|---|---|---|---|
Similarity threshold (%) | # OTUs (≥1 reads)b | # OTUs (≥10 reads) | # OTUs (≥1 reads)b | # OTUs (≥10 reads) | # OTUs (≥1 reads)b | # OTUs (≥10 reads) |
1 | 4569 (3103) | 237 | 11,362 (3634) | 106 | 6636 (2412) | 25 |
2 | 2282 (922) | 171 | 6604 (725) | 304 | 3938 (514) | 103 |
3 | 1109 (237) | 187 | 3397 (180) | 1223 | 2056 (128) | 616 |
4 | 532 (73) | 186 | 1502 (62) | 948 | 967 (50) | 557 |
5 | 271 (22) | 141 | 567 (25) | 371 | 388 (23) | 224 |
6 | 131 (9) | 88 | 240 (12) | 154 | 167 (11) | 93 |