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Fig. 2 | Microbiome

Fig. 2

From: Metatranscriptomic analysis of diverse microbial communities reveals core metabolic pathways and microbiome-specific functionality

Fig. 2

Taxonomic composition of five metatranscriptomic datasets. a Abundance of 10 major bacterial phyla and sub-phyla across the five samples. Also shown are the observed frequency of assignments in the 2271 microbial genomes used in the BWA and BLAT searches as well as the protein non-redundant database. b Phylogenetic representation of major genera (represented by at least 100 reads) associated with the five datasets. Node size represents the relative abundance of reads mapped to the corresponding genus in each sample. For each dataset, reads were normalized by the average read count associated with each sample (see Methods). c Top ten most abundant species associated with each dataset (by number of reads; minimum 100 transcripts)

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