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Table 4 Number of Propionibacterium spp., Ralstonia spp., and Staphylococcus epidermidis read pairs in all cancer types

From: Distinguishing potential bacteria-tumor associations from contamination in a secondary data analysis of public cancer genome sequence data

Cancer type

Total read pairs

Total bacterial read pairs

Propionibacterium read pairs

Ralstonia read pairs

Staphylococcus epidermis read pairs

AML

7,955,502,437

29,458,420

46,372

4,502,338

9013

BRCA

6,093,925,360

988,137

14,526

78,895

1220

GBM

5,391,069,119

20,802

1976

8244

105

KIRC

5,070,366,679

356,674

31,553

5104

1428

KIRP

541,775,677

52,313

1394

669

128

LUAD

980,790,987

29,583

534

914

28

LUSC

1,166,304,426

107,515

12,403

5345

5714

OV

8,643,898,191

34,724

196

64

23

STAD

6,689,562,270

4,847,299

31,006

1983

1323