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Table 2 General genome features of vertical transmitted bifidobacterial strains

From: Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission

 

Couple ID

Biological origin

Contig

Genome length

% GC

Predicted ORFs

tRNA

rRNA

Bifidobacterium longum subsp. longum 1886B

TVTR_10006

Human milk

47

2473746 bp

61.14%

2137

62

3

Bifidobacterium bifidum 1887B

TVTR_10006

Human milk

21

2255543 bp

59.49%

1851

53

3

Bifidobacterium longum subsp. infantis 1888B

TVTR_10020

Infant stool

26

2579732 bp

59.40%

2212

55

3

Bifidobacterium breve 1889B

TVTR_10005

Infant stool

22

2344818 bp

59.66%

2037

53

2

Bifidobacterium longum subsp. longum 1890B

TVTR_10023

Infant stool

109

2341670 bp

59.55%

1955

60

2

Bifidobacterium breve 1891B

TVTR_10008

Infant stool

38

2089648 bp

59.70%

2115

54

2

Bifidobacterium adolescentis 1892B

TVTR_10024

Infant stool

11

2150850 bp

58.65%

1720

55

4

Bifidobacterium dentium 1893B

TVTR_10034

Infant stool

24

2271880 bp

58.74%

2070

56

4

Bifidobacterium breve 1895B

TVPR_01

Infant stool

17

20270860 bp

58.58%

1871

53

2

Bifidobacterium pseudocatenulatum1896B

TVPR_01

Human milk

15

2197471 bp

56.15%

1733

54

5

Bifidobacterium longum subsp. longum 1897B

TVTR_10030

Human milk

55

2453605 bp

59.50%

2143

55

2

Bifidobacterium longum subsp. longum 1898B

TVTR_10008

Infant stool

41

2474386 bp

59.47%

2049

57

3

Bifidobacterium catenulatum 1899B

TVTR_10029

Infant stool

14

2124599 bp

58.90%

1749

55

5

Bifidobacterium breve 1900B

TVTR_10031

Infant stool

22

2287865 bp

59.50%

1910

53

2