From: Virome comparisons in wild-diseased and healthy captive giant pandas
Library ID | Sample type | No. of Sample | Healthy status | Habitation | Total no. of raw reads | No. of unique reads |
---|---|---|---|---|---|---|
WB1 | Blood | 1 | Sick | Wild | 361,812 | 29,382 |
CB2 | Blood | 1 | Normal | Captive | 434,190 | 31,095 |
CB3 | Blood | 1 | Normal | Captive | 18,834 | 2852 |
CB4 | Blood | 1 | Normal | Captive | 2,527,742 | 275,698 |
CB5 | Blood | 1 | Normal | Captive | 157,152 | 9274 |
CB6 | Blood | 1 | Normal | Captive | 428,670 | 29,353 |
CB7 | Blood | 1 | Normal | Captive | 11,236 | 1887 |
CB8 | Blood | 1 | Normal | Captive | 126,664 | 34,738 |
CB9 | Blood | 1 | Normal | Captive | 2,199,190 | 156,333 |
CB10 | Blood | 1 | Normal | Captive | 491,388 | 38,996 |
CB11 | Blood | 1 | Normal | Captive | 227,730 | 26,883 |
CB12 | Blood | 1 | Normal | Captive | 176,224 | 21,045 |
15FSW | Feces | 1 | Sick | Wild | 194,826 | 70,181 |
16FNW | Feces | 1 | Normal | Wild | 528,634 | 164,066 |
17FNC | Feces | 3 | Normal | Captive | 977,118 | 534,051 |
18FNC | Feces | 3 | Normal | Captive | 1,137,802 | 779,197 |
19FNC | Feces | 3 | Normal | Captive | 976,318 | 541,294 |
20FNC | Feces | 3 | Normal | Captive | 1,608,664 | 1,137,893 |
21FNC | Feces | 3 | Normal | Captive | 1,222,508 | 933,678 |
22FNC | Feces | 3 | Normal | Captive | 1,290,834 | 906,394 |
23FNC | Feces | 3 | Normal | Captive | 2,906,028 | 1,526,096 |
24FNC | Feces | 4 | Normal | Captive | 588,344 | 467,682 |
25FNC | Feces | 1 | Normal | Captive | 542,450 | 323,462 |
26FNC | Feces | 1 | Normal | Captive | 213,834 | 73,624 |
27FNC | Feces | 1 | Normal | Captive | 326,788 | 201,519 |
NSW1 | Oral swab | 1 | Sick | Wild | 292,802 | 120,260 |
NSC2 | Oral swab | 1 | Normal | Captive | 192,224 | 64,507 |
NSC3 | Oral swab | 1 | Normal | Captive | 321,150 | 99,124 |
NSC4 | Oral swab | 1 | Normal | Captive | 898,688 | 434,150 |
NSC5 | Oral swab | 1 | Normal | Captive | 208,236 | 53,208 |
NSC6 | Oral swab | 1 | Normal | Captive | 613,348 | 337,452 |
NSC7 | Oral swab | 1 | Normal | Captive | 1,266,946 | 194,751 |
NSC8 | Oral swab | 1 | Normal | Captive | 235,500 | 62,890 |
NSC9 | Oral swab | 1 | Normal | Captive | 362,618 | 103,994 |
NSC10 | Oral swab | 1 | Normal | Captive | 319,506 | 88,356 |
NSC11 | Oral swab | 1 | Normal | Captive | 176,696 | 77,722 |
THE | Heart | 1 | Sick | Wild | 574,430 | 84,312 |
TLI | Liver | 1 | Sick | Wild | 546,204 | 109,832 |
TSP | Spleen | 1 | Sick | Wild | 447,030 | 35,613 |
TLU | Lung | 1 | Sick | Wild | 274,480 | 48,401 |
TKI | Kidney | 1 | Sick | Wild | 353,176 | 55,164 |