Gene | Oligonucleotide | Annealing T° | Antibiotic group | Resistance mechanisms | Ref. |
---|---|---|---|---|---|
tet(W) | F-AAGCGGCAGTCACTTCCTTCCR-TCAAGTATCCCAGCGAAACC | 60 | Tetracyclines | Ribosomal Protection Protein | [49] |
tet(M) | F-ACAGAAAGCTTATTATATAACR-TGGCGTGTCTATGATGTTCAC | 55 | Tetracyclines | Ribosomal Protection Protein | [49] |
tet(O) | F-ACGGARAGTTTATTGTATACCR-TGGCGTATCTATAATGTTGAC | 60 | Tetracyclines | Ribosomal Protection Protein | [49] |
tetA(B) | F-TTGGTTAGGGGCAAGTTTTGR-GTAATGGGCCAATAACACCG | 55 | Tetracyclines | Efflux pump | [63] |
bla tem | F-TTTCGTGTCGCCCTTATTCCR-CCGGCTCCAGATTTATCAGC | 60 | Penicillins | β-lactamase | [63] |
bla CTX-M | F-ATGTGCAGYACCAGTAARGTKATGGCR-GGGTRAARTARGTSACCAGAAYSAGCGG | 60 | Penicillins | β-lactamase | [50] |
bla SHV | F-CACTCAAGGATGTATTGTGR-TTAGCGTTGCCAGTGCTCG | 58 | Penicillins | β-lactamase | [64] |
mecA | F-GGGATCATAGCGTCATTATTCR-AACGATTGTGACACGATAGCC | 56 | Penicillins | Penicillin-binding protein 2a | [50] |
aac(6″)-Ie-aph(2″) | F-CCAAGAGCAATAAGGGCATACCR-CACACTATCATAACCATCACCG | 55 | Aminoglycosides | Bifunctional acetyltransferase phosphotransferase | [64] |
strA | F-CTTGGTGATAACGGCAATTCR-CCAATCGCAGATAGAAGGC | 65 | Aminoglycosides | Phosphotransferase | [63] |
cmlA1 | F-CACCAATCATGACCAAGR-GGCATCACTCGGCATGGACATG | 60 | Chloramphenicol | Efflux pump | [63] |