From: Characterization of the upper and lower respiratory tract microbiota in Piedmontese calves
ID | Farm | Age (months) | Sex | Weight (kg) | Previous episodes of BRD | Spontaneous cough | Nasal discharge | Abnormal lung sounds | Read number NS sample | Read number TTA sample |
---|---|---|---|---|---|---|---|---|---|---|
1a | TO1 | 14 | M | 400 | 3Â months before sampling | Repeated | Cloudy and bilateral | Wheezes and crackles on the left side of the thorax | NP | 53,494 |
2b | CN1 | 6 | M | 180 | No | Absent | Absent | Absent | NP | 7902 |
3a | CN1 | 6 | M | 180 | 1Â month before sampling | Occasional | Absent | Wheezes and crackles on both sides of the thorax | NP | 47,115 |
4b | CN1 | 6 | M | 180 | No | Absent | Absent | Absent | NP | 18,855 |
5b | CN1 | 6 | M | 180 | No | Absent | Absent | Absent | NP | 81,564 |
6a | CN2 | 6 | M | 180 | No | Absent | Cloudy and unilateral | Absent | 36,160 | 129,750 |
7b | CN2 | 6 | M | 180 | No | Absent | Absent | Absent | 28,543 | 118,454 |
8b | CN2 | 6 | M | 180 | No | Absent | Absent | Absent | 31,232 | 61,778 |
9a | CN2 | 6 | M | 180 | No | Absent | Cloudy and bilateral | Wheezes and crackles on both sides of the thorax | DNA < 5 ng/μl | DNA < 5 ng/μl |
10a | VC1 | 5 | F | 150 | No | Repeated | Absent | Wheezes and crackles on both sides of the thorax | 40,694 | 142,459 |
11a | VC1 | 5 | F | 150 | 2 months before sampling | Absent | Absent | Wheezes and crackles on both sides of the thorax | 12,952 | DNA < 5 ng/μl |
12b | VC1 | 5 | F | 150 | No | Absent | Absent | Absent | 5988 | DNA < 5 ng/μl |
13a | VC1 | 5 | M | 150 | No | Absent | Absent | Wheezes and crackles on both sides of the thorax | 24,070 | 26,910 |
14b | TO2 | 6 | M | 200 | No | Absent | Absent | Absent | DNA < 5 ng/μl | 68,954 |
15b | TO2 | 6 | F | 200 | No | Absent | Absent | Absent | 20,464 | 40,790 |
16a | TO2 | 6 | F | 200 | No | Absent | Absent | Wheezes and crackles on the right side of the thorax | 167,198 | 107,679 |
17a | TO2 | 6 | F | 200 | No | Absent | Cloudy and bilateral | Absent | DNA < 5 ng/μl | 143,886 |
18b | TO2 | 6 | M | 200 | No | Absent | Absent | Absent | 3932 | 55,630 |
19b | TO2 | 6 | M | 200 | No | Absent | Absent | Absent | DNA < 5 ng/μl | 1,825c |
20b | TO2 | 6 | M | 200 | No | Absent | Absent | Absent | 154,004 | 4585 |
21b | TO3 | 5 | M | 170 | No | Absent | Absent | Absent | 1,536c | 6833 |
22b | TO3 | 5 | M | 170 | No | Absent | Absent | Absent | 159c | 189c |