Fig. 1
From: Integrated multi-omic analysis of host-microbiota interactions in acute oak decline
Metagenomics reveals distinct microbiomes and functional genes between symptomatic and non-symptomatic samples. a Shift of metagenomic functional categories relative abundances between symptomatic and non-symptomatic samples. The STAMP software was used to draw a heatmap comparing the relative abundances of level 2 SEED subsystems associated with bacterial virulence, plant defence and hormone production in the samples. b A principal component analysis of the samples based on functional SEED subsystem categories. SEED subsystem genesets were found to be statistically significant using White’s non-parametric t test and Benjamini-Hochberg multiple test correction