From: The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome
Community | Treatment | OTU no. | DB classification | BLASTn classification | Identity percentage/E-value | Relative abundance |
---|---|---|---|---|---|---|
All samples | Leaf | 6 | Pseudomonas sp. | Pseudomonas sp. | 100/3e−128 | 2.2 |
All samples | Leaf | 14 | Pseudomonas sp. | Pseudomonas oryzihabitans strain* | 100/3e−128 | 1.9 |
All samples | Leaf | 2 | Ascomycota | Marssonina brunnea | 100/6e−99 | 4.3 |
All samples | Leaf | 14,988 | Ascomycota | Marssonina brunnea | 100/5e−95 | 2.2 |
All samples | Stem | 16 | Chytridiomycota | Trebouxia impressa | 100/6e−99 | 1.3 |
All samples | Root | 11,331 | Pseudomonas sp. | Pseudomonas sp. | 98/1e−121 | 1.3 |
All samples | Root | 10,451 | Codinaeopsis sp. | Codinaeopsis sp.** | 99/2e−94 | 1.6 |
All samples | Root | 42 | Ascomycota | Uncultured fungus | 98/3e−72 | 1.1 |
All samples | TD | 2 | Ascomycota | Marssonina brunnea | 100/6e−99 | 4.3 |
All samples | TD | 14,988 | Ascomycota | Marssonina brunnea | 100/5e−95 | 2.2 |
Leaf | DD | 66 | Exobasidiomycetes | Telletiopsis washingtonensis | 100/6e−99 | 1.1 |
Leaf | TD | 14,988 | Ascomycota | Marssonina brunnea | 100/5e−95 | 13.4 |
Leaf | TD | 2 | Ascomycota | Marssonina brunnea | 100/6e−99 | 7.1 |
Leaf | TD | 6721 | Ascomycota | Marssonina brunnea | 99/1e−90 | 1.7 |
Leaf | TD | 2744 | Ascomycota | Marssonina brunnea | 99/7e−89 | 1.1 |
Leaf | TD | 3701 | Ascomycota | Marssonina brunnea | 98/7e−89 | 1.0 |
Leaf | TD | 19,038 | Ascomycota | Marssonina brunnea | 100/8e−93 | 1.0 |
Stem | TD | 151 | Microbacteriaceae | Curtobacterium flaccumfaciens strain | 100/3e−128 | 1.6 |
Stem | TD | 14,143 | Sphaceloma protearum | Elsinoe banksiae | 96/7e−84 | 2.6 |