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Table 1 Performances of SRC_c

From: A de novo approach to disentangle partner identity and function in holobiont systems

  

Time(hh:mm:ss)

Memory (Gb)

Cnidaria-Dinophyta holobiont (M1)

All symbionts library (M1a)

15:40:42

34.2

Symbiodinium spp. library (M1b)

01:34:57

6.96

Other symbionts library (M1c)

15:08:45

33.7

Host library

01:06:56

3.9

Porifera-Bacteria holobiont (M2)

Symbionts library

21:04:47

58.9

Host library

02:46:06

9.60

Radiolaria-Dinophyta holobiont (M3)

Symbionts library

07:05:28

4.10

Host library

00:05:57

3.9

  1. Memory peak and wallclock time of SRC_c indexing and query steps on the several data sets for models M1, M2, and M3