Tool | TP | FP | FN | Recall | Precision | F-score |
---|---|---|---|---|---|---|
Pfam gold standard | ||||||
 UProC | 323 659 | 31 539 | 357 182 | 47.5 | 91.1 | 62.5 |
 MetaCLADE | 291 896 | 57 955 | 388 945 | 42.9 | 83.4 | 56.6 |
 HMM-GRASPx | 325 689 | 41 155 | 355 152 | 47.8 | 88.8 | 62.2 |
 MetaCLADE+UProC | 370 274 | 72 132 | 310 567 | 54.4 | 83.7 | 65.9 |
 UProC+MetaCLADE | 378 449 | 70 063 | 302 392 | 55.6 | 84.4 | 67.0 |
 UProC clan | 328 910 | 26 288 | 351 931 | 48.3 | 92.6 | 63.5 |
 MetaCLADE clan | 309 629 | 40 222 | 371 212 | 45.5 | 88.5 | 60.1 |
 HMM-GRASPx clan | 334 480 | 32 364 | 346 361 | 49.1 | 91.2 | 63.9 |
 MetaCLADE+UProC clan | 389 454 | 52 952 | 291 387 | 57.2 | 88.0 | 69.3 |
 UProC+MetaCLADE clan | 390 388 | 58 124 | 290 453 | 57.3 | 87.0 | 69.1 |
CLADE gold standard | ||||||
 UProC | 308 483 | 48 077 | 476 068 | 39.3 | 86.5 | 54.1 |
 MetaCLADE | 286 458 | 48 696 | 498 093 | 36.5 | 85.5 | 51.2 |
 HMM-GRASPx | 296 742 | 69 211 | 487 809 | 37.8 | 81.1 | 51.6 |
 MetaCLADE+UProC | 361 794 | 64 085 | 422 757 | 46.1 | 85.0 | 59.8 |
 UProC+MetaCLADE | 366 221 | 66 114 | 418 330 | 46.7 | 84.7 | 60.2 |
 UProC clan | 336 302 | 20 258 | 448 249 | 42.9 | 94.3 | 58.9 |
 MetaCLADE clan | 323 009 | 12 145 | 461 542 | 41.2 | 96.4 | 57.7 |
 HMM-GRASPx clan | 328 729 | 37 224 | 455 822 | 41.9 | 89.8 | 57.1 |
 MetaCLADE+UProC clan | 405 734 | 20 145 | 378 817 | 51.7 | 95.3 | 67.0 |
 UProC+MetaCLADE clan | 406 370 | 25 965 | 378 181 | 51.8 | 94.0 | 66.8 |