Tool | TP | FP | FN | Recall | Precision | F-score |
---|---|---|---|---|---|---|
Pfam gold standard | ||||||
 UProC | 252 245 | 28 101 | 161 239 | 61.0 | 90.0 | 72.7 |
 MetaCLADE | 307 711 | 50 380 | 105 773 | 74.4 | 85.9 | 79.8 |
 HMM-GRASPx | 288 152 | 38 152 | 125 332 | 69.7 | 88.3 | 77.9 |
 MetaCLADE+UProC | 319 829 | 55 189 | 93 655 | 77.3 | 85.3 | 81.1 |
 UProC+MetaCLADE | 326 133 | 56 556 | 87 351 | 78.9 | 85.2 | 81.9 |
 UProC clan | 256 847 | 23 499 | 156 637 | 62.1 | 91.6 | 74.0 |
 MetaCLADE clan | 326 217 | 31 874 | 87 267 | 78.9 | 91.1 | 84.6 |
 HMM-GRASPx clan | 293 267 | 33 037 | 120 217 | 70.9 | 89.9 | 79.3 |
 MetaCLADE+UProC clan | 338 609 | 36 409 | 74 875 | 81.9 | 90.3 | 85.9 |
 UProC+MetaCLADE clan | 339 285 | 43 404 | 74 199 | 82.1 | 88.7 | 85.2 |
CLADE gold standard | ||||||
 UProC | 240 762 | 43 085 | 244 393 | 49.6 | 84.8 | 62.6 |
 MetaCLADE | 302 583 | 63 491 | 182 572 | 62.4 | 82.7 | 71.1 |
 HMM-GRASPx | 262 511 | 64 833 | 222 644 | 54.1 | 80.2 | 64.6 |
 MetaCLADE+UProC | 316 656 | 68 490 | 168 499 | 65.3 | 82.2 | 72.8 |
 UProC+MetaCLADE | 322 760 | 70 325 | 162 395 | 66.5 | 82.1 | 73.5 |
 UProC clan | 264 787 | 19 060 | 220 368 | 54.6 | 93.3 | 68.9 |
 MetaCLADE clan | 347 936 | 18 138 | 137 219 | 71.7 | 95.0 | 81.7 |
 HMM-GRASPx clan | 290 155 | 37 189 | 195 000 | 59.8 | 88.6 | 71.4 |
 MetaCLADE+UProC clan | 363 667 | 21 479 | 121 488 | 75.0 | 94.4 | 83.6 |
 UProC+MetaCLADE clan | 364 641 | 28 444 | 120 514 | 75.2 | 92.8 | 83.0 |