Fig. 2
From: Hidden in plain sight—highly abundant and diverse planktonic freshwater Chloroflexi
Phylogeny of the Chloroflexi-reconstructed MAGs. Maximum likelihood phylogenomic tree reconstructed by adding the complete genomes and available MAGs of representatives from all known Chloroflexi classes and reconstructed MAGs of this study with completeness higher than 30% (shown in red for freshwater originated MAGs and blue for the Caspian Sea MAGs) to the built-in tree of life in PhyloPhlAN. An asterisk next to a MAG shows the presence of 16S rRNA. Bootstrap values (%) are indicated at the base of each node. Legends for lifestyle hints are on the bottom left. Average nucleotide identity comparison (ANI) heat map for MAGs of each cluster is shown to the right of each cluster. Reconstructed genomes belonging to the same species are shown inside a gray box. A color key for ANI is shown at the bottom left. The green box shows the aerobic anoxygenic phototrophic members of the class Chloroflexia