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Fig. 7 | Microbiome

Fig. 7

From: Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers’ diarrhea

Fig. 7

Clustering patterns of crAssphage and “crish” viruses. a Examples of the contig co-clustering patterns in the k-mer signature-based scatter plot in samples 3, 50395, and 540. The large panels are the zoom-in views of the red boxes in the small panels, which represent the entire microbiomes. The size and opacity of a dot are proportional to the length and coverage of the contig, respectively. Contigs mapped to five representative bacteria in proximity to the viruses are colored. Extracted virus bins are highlighted by red edges and labeled by the bin ID and the virus cluster name. b Pairwise average nucleotide identity (ANI) matrix of crAssphage’s and nine clusters of “crish” viruses (assigned by letters A to I). ANI values below 70% are grayed out. The dendrogram shows the hierarchical clustering result based on the ANI matrix. The reference crAssphage genome is included for comparison. Bins that are too fragmented, incomplete, and/or low abundance are not included. Singletons are not included

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